A Cell-Based Assay Reveals Nuclear Translocation of Intracellular Domains Released by SPPL Proteases

Traffic. 2015 Aug;16(8):871-92. doi: 10.1111/tra.12287. Epub 2015 May 6.

Abstract

During regulated intramembrane proteolysis (RIP) a membrane-spanning substrate protein is cleaved by an ectodomain sheddase and an intramembrane cleaving protease. A cytoplasmic intracellular domain (ICD) is liberated, which can migrate to the nucleus thereby influencing transcriptional regulation. Signal peptide peptidase-like (SPPL) 2a and 2b have been implicated in RIP of type II transmembrane proteins. Even though SPPL2a might represent a potential pharmacological target for treatment of B-cell-mediated autoimmunity, no specific and potent inhibitors for this enzyme are currently available. We report here on the first quantitative cell-based assay for measurement of SPPL2a/b activity. Demonstrating the failure of standard Gal4/VP16 reporter assays for SPPL2a/b analysis, we have devised a novel system employing β-galactosidase (βGal) complementation. This is based on detecting nuclear translocation of the proteolytically released substrate ICDs, which results in specific restoration of βGal activity. Utilizing this potentially high-throughput compatible new setup, we demonstrate nuclear translocation of the ICDs from integral membrane protein 2B (ITM2B), tumor necrosis factor (TNF) and CD74 and identify secreted frizzled-related protein 2 (SFRP2) as potential transcriptional downstream target of the CD74 ICD. We show that the presented assay is easily adaptable to other intramembrane proteases and therefore represents a valuable tool for the functional analysis and development of new inhibitors of this class of enzymes.

Keywords: intramembrane proteolysis; nuclear translocation; protein fragment complementation; signal peptide peptidase-like protease; β-galactosidase; γ-secretase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Active Transport, Cell Nucleus
  • Adaptor Proteins, Signal Transducing
  • Amino Acid Sequence
  • Antigens, Differentiation, B-Lymphocyte / metabolism
  • Aspartic Acid Endopeptidases / chemistry
  • Aspartic Acid Endopeptidases / metabolism*
  • Cell Nucleus / metabolism*
  • HEK293 Cells
  • HeLa Cells
  • Histocompatibility Antigens Class II / metabolism
  • Humans
  • Membrane Glycoproteins / metabolism
  • Molecular Sequence Data
  • Nuclear Localization Signals*
  • Protein Structure, Tertiary
  • Proteolysis
  • Tumor Necrosis Factor-alpha / metabolism

Substances

  • Adaptor Proteins, Signal Transducing
  • Antigens, Differentiation, B-Lymphocyte
  • Histocompatibility Antigens Class II
  • ITM2B protein, human
  • Membrane Glycoproteins
  • Nuclear Localization Signals
  • Tumor Necrosis Factor-alpha
  • invariant chain
  • Aspartic Acid Endopeptidases
  • SPPL2a protein, human
  • SPPL2b protein, human