Functional Analysis of Two l-Arabinose Transporters from Filamentous Fungi Reveals Promising Characteristics for Improved Pentose Utilization in Saccharomyces cerevisiae

Appl Environ Microbiol. 2015 Jun 15;81(12):4062-70. doi: 10.1128/AEM.00165-15. Epub 2015 Apr 3.

Abstract

Limited uptake is one of the bottlenecks for l-arabinose fermentation from lignocellulosic hydrolysates in engineered Saccharomyces cerevisiae. This study characterized two novel l-arabinose transporters, LAT-1 from Neurospora crassa and MtLAT-1 from Myceliophthora thermophila. Although the two proteins share high identity (about 83%), they display different substrate specificities. Sugar transport assays using the S. cerevisiae strain EBY.VW4000 indicated that LAT-1 accepts a broad substrate spectrum. In contrast, MtLAT-1 appeared much more specific for l-arabinose. Determination of the kinetic properties of both transporters revealed that the Km values of LAT-1 and MtLAT-1 for l-arabinose were 58.12 ± 4.06 mM and 29.39 ± 3.60 mM, respectively, with corresponding Vmax values of 116.7 ± 3.0 mmol/h/g dry cell weight (DCW) and 10.29 ± 0.35 mmol/h/g DCW, respectively. In addition, both transporters were found to use a proton-coupled symport mechanism and showed only partial inhibition by d-glucose during l-arabinose uptake. Moreover, LAT-1 and MtLAT-1 were expressed in the S. cerevisiae strain BSW2AP containing an l-arabinose metabolic pathway. Both recombinant strains exhibited much faster l-arabinose utilization, greater biomass accumulation, and higher ethanol production than the control strain. In conclusion, because of higher maximum velocities and reduced inhibition by d-glucose, the genes for the two characterized transporters are promising targets for improved l-arabinose utilization and fermentation in S. cerevisiae.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabinose / metabolism*
  • Biological Transport
  • Biomass
  • Ethanol / metabolism
  • Fermentation / genetics
  • Genetic Engineering
  • Glucose / metabolism
  • Kinetics
  • Metabolic Networks and Pathways
  • Monosaccharide Transport Proteins / chemistry
  • Monosaccharide Transport Proteins / genetics*
  • Monosaccharide Transport Proteins / metabolism*
  • Neurospora crassa / genetics*
  • Pentoses / metabolism*
  • Saccharomyces cerevisiae / genetics
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae / ultrastructure
  • Sordariales / genetics*
  • Sordariales / metabolism
  • Xylose / metabolism

Substances

  • Monosaccharide Transport Proteins
  • Pentoses
  • Ethanol
  • Xylose
  • Arabinose
  • Glucose