Genetic heterogeneity of the β-globin gene in various geographic populations of Yunnan in southwestern China

PLoS One. 2015 Apr 7;10(4):e0122956. doi: 10.1371/journal.pone.0122956. eCollection 2015.

Abstract

Objectives: The aim of this study was to investigate the geographic distribution of β-globin gene mutations in different ethnic groups in Yunnan province.

Methods: From 2004 to 2014, 1,441 subjects with hemoglobin disorders, identified by PCR-reverse dot blot and DNA sequencing, were studied according to ethnicity and geographic origin. Haplotypes were examined among 41 unrelated thalassemia chromosomes.

Results: Eighteen β-thalassemia mutations and seven hemoglobin variants were identified for 1,616 alleles in 22 different ethnic groups from all 16 prefecture-level divisions of Yunnan. The prevalence of β-thalassemia was heterogeneous and regionally specific. CD 41-42 (-TCTT) was the most prevalent mutation in the populations of northeastern Yunnan. CD 17 (A>T) was the most common mutation in the populations of southeastern Yunnan, especially for the Zhuang minority, whereas Hb E (CD 26, G>A) was the most prevalent mutation in populations of southwestern Yunnan, especially for the Dai minority. Among the seven types of haplotypes identified, CD 17 (A>T) was mainly linked to haplotype VII (+ - - - - - +) and IVS-II-654 (C>T) was only linked to haplotype I (+ - - - - + +).

Conclusion: Our data underline the heterogeneity of β-globin gene mutations in Yunnan. This distribution of β-globin mutations in the geographic regions and ethnic populations provided a detailed ethnic basis and evolutionary view of humans in southern China, which will be beneficial for genetic counseling and prevention strategies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Child, Preschool
  • China / epidemiology
  • DNA Mutational Analysis
  • Female
  • Gene Frequency
  • Genetic Association Studies
  • Haplotypes
  • Humans
  • Infant
  • Male
  • Middle Aged
  • Prevalence
  • Young Adult
  • beta-Globins / genetics*
  • beta-Thalassemia / epidemiology
  • beta-Thalassemia / genetics*

Substances

  • beta-Globins

Grants and funding

This study was conducted between the years 2012 and 2013 under the “the prevention and control programme of thalassemia in Yunnan”. And this study was partially funded by the Fund of National Natural Science Foundation (81260415, 30760241), by key Natural Science Foundation of Yunnan Province (2011FB164), and by Natural Science Foundation of Yunnan Province (2011FB224). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.