Abstract
We aimed to exploit novel compounds with high selectivity to clear cell renal cell carcinoma (ccRCC) with common mutations. Using the GDSC databases, we searched for compounds with high selectivity for ccRCC with VHL and/or SETD2 mutations. Clinical impact and gene interactions were analysed using TCGA database. In vitro and in vivo studies were performed to validate the inhibitory effects of the compound. We identified the selective PI3Kβ inhibitor TGX221 as a selective inhibitor for ccRCC with both VHL and SETD2 mutations. TGX221 also targeted cancer cells with CDKN2A and PTEN mutations. Changes in PTEN and CDKN2A gene sets were associated with worsened prognosis of ccRCC. TGX221 substantially and selectively inhibited the down stream products of VHL, SETD2, and PTEN in ccRCC cells with VHL and SETD2 mutations. TGX221 also exhibited significant selectivity in inhibiting cell motility and tumourigenesis of ccRCC cells with VHL and SETD2 mutations. TGX221 is a novel inhibitor with high selectivity for ccRCC with VHL and SETD2 mutations. It also targeted PTEN and CDKN2A mutations. How those genes were associated with PI3Kβ warranted further investigations.
Publication types
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Research Support, Non-U.S. Gov't
MeSH terms
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Antineoplastic Agents / pharmacology
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Carcinoma, Renal Cell / genetics*
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Carcinoma, Renal Cell / metabolism
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Cell Line, Tumor
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Cell Movement / drug effects
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Cell Movement / genetics
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Cell Transformation, Neoplastic / drug effects
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Cell Transformation, Neoplastic / genetics
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Cyclin-Dependent Kinase Inhibitor p16 / genetics
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Cyclin-Dependent Kinase Inhibitor p16 / metabolism
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Drug Resistance, Neoplasm / genetics
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Histone-Lysine N-Methyltransferase / genetics*
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Humans
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Kidney Neoplasms / genetics*
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Kidney Neoplasms / metabolism
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Morpholines / pharmacology*
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Mutation*
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PTEN Phosphohydrolase / genetics
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PTEN Phosphohydrolase / metabolism
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Phosphoinositide-3 Kinase Inhibitors
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Phosphorylation
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Pyrimidinones / pharmacology*
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Receptor, Notch1 / genetics
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Receptor, Notch1 / metabolism
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Signal Transduction / drug effects
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Von Hippel-Lindau Tumor Suppressor Protein / genetics*
Substances
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Antineoplastic Agents
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Cyclin-Dependent Kinase Inhibitor p16
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Morpholines
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Phosphoinositide-3 Kinase Inhibitors
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Pyrimidinones
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Receptor, Notch1
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TGX 221
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Histone-Lysine N-Methyltransferase
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SETD2 protein, human
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Von Hippel-Lindau Tumor Suppressor Protein
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PTEN Phosphohydrolase
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VHL protein, human