Promoter analysis of influenza virus RNA polymerase

J Virol. 1989 Dec;63(12):5142-52. doi: 10.1128/JVI.63.12.5142-5152.1989.

Abstract

Influenza virus polymerase, which was prepared depleted of viral RNA, was used to copy small RNA templates prepared from plasmid-encoded sequences. Template constructions containing only the 3' end of genomic RNA were shown to be efficiently copied, indicating that the promoter lay solely within the 15-nucleotide 3' terminus. Sequences not specific for the influenza virus termini were not copied, and, surprisingly, RNAs containing termini identical to those from plus-sense cRNA were copied at low levels. The specificity for recognition of the virus sense promoter was further defined by site-specific mutagenesis. It was also found that increased levels of viral protein were required in order to catalyze both the cap endonuclease-primed and primer-free RNA synthesis from these model templates, as well as from genomic-length RNAs. This finding indicates that the reconstituted system has catalytic properties very similar to those of native viral ribonucleoprotein complexes.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Base Sequence
  • DNA-Directed RNA Polymerases / isolation & purification
  • DNA-Directed RNA Polymerases / metabolism*
  • Genes, Viral
  • Molecular Sequence Data
  • Oligonucleotide Probes
  • Orthomyxoviridae / genetics*
  • Plasmids
  • Promoter Regions, Genetic*
  • RNA, Viral / biosynthesis
  • RNA, Viral / genetics*
  • Templates, Genetic
  • Transcription, Genetic

Substances

  • Oligonucleotide Probes
  • RNA, Viral
  • DNA-Directed RNA Polymerases