Histone modifications predispose genome regions to breakage and translocation

Genes Dev. 2015 Jul 1;29(13):1393-402. doi: 10.1101/gad.262170.115. Epub 2015 Jun 23.

Abstract

Chromosome translocations are well-established hallmarks of cancer cells and often occur at nonrandom sites in the genome. The molecular features that define recurrent chromosome breakpoints are largely unknown. Using a combination of bioinformatics, biochemical analysis, and cell-based assays, we identify here specific histone modifications as facilitators of chromosome breakage and translocations. We show enrichment of several histone modifications over clinically relevant translocation-prone genome regions. Experimental modulation of histone marks sensitizes genome regions to breakage by endonuclease challenge or irradiation and promotes formation of chromosome translocations of endogenous gene loci. Our results demonstrate that histone modifications predispose genome regions to chromosome breakage and translocations.

Keywords: chromatin structure; chromosome translocations; histone modifications.

Publication types

  • Research Support, N.I.H., Intramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line, Tumor
  • Chromosome Breakage*
  • Computational Biology
  • DNA Breaks, Double-Stranded / radiation effects
  • Endonucleases / metabolism
  • Genome, Human / genetics*
  • Histones / genetics
  • Histones / metabolism*
  • Humans
  • Lymphoma, Large-Cell, Anaplastic / physiopathology
  • Methylation
  • Translocation, Genetic*

Substances

  • Histones
  • Endonucleases