Analysis of EV71 infection progression using triple-SILAC-based proteomics approach

Proteomics. 2015 Nov;15(21):3629-43. doi: 10.1002/pmic.201500180. Epub 2015 Sep 28.

Abstract

Enterovirus 71 (EV71), a member of Picornaviridae, causes severe neurological and systemic illness in children. To better understand the virus-host cell interactions, we performed a triple-SILAC-based quantitative proteomics study monitoring host cell proteome changes after EV71 infection. Based on the quantitative data for more than 4100 proteins, ∼17% of the proteins were found as significantly changed (p<0.01) at either 8 or 20 hours post infection. Five biological processes and seven protein classes showed significant differences. Functional screening of nine regulated proteins discovered the regulatory role of CHCH2, a mitochondrial protein known as a transcriptional activator for cytochrome c oxidase, in EV71 replication. Further studies showed that CHCH2 served as a negative regulator of innate immune responses. All MS data have been deposited in the ProteomeXchange with identifier PXD002483 (http://proteomecentral.proteomexchange.org/dataset/PXD002483).

Keywords: CHCH2; Cell biology; Enterovirus 71; Picornaviridae; Triple SILAC.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Disease Progression
  • Enterovirus A, Human / immunology
  • Enterovirus A, Human / physiology*
  • Enterovirus Infections / immunology
  • Enterovirus Infections / metabolism*
  • Enterovirus Infections / pathology
  • Host-Pathogen Interactions*
  • Humans
  • Immunity, Innate
  • Proteome / analysis
  • Proteome / immunology
  • Proteome / metabolism*
  • Proteomics / methods*

Substances

  • Proteome