Complete genome of Pandoraea pnomenusa RB-38, an oxalotrophic bacterium isolated from municipal solid waste landfill site

Yan-Lue Lim; Robson Ee; Delicia Yong; Kok-Keng Tee; Wai-Fong Yin; Kok-Gan Chan

doi:10.1016/j.jbiotec.2015.09.018

Complete genome of Pandoraea pnomenusa RB-38, an oxalotrophic bacterium isolated from municipal solid waste landfill site

J Biotechnol. 2015 Nov 20:214:83-4. doi: 10.1016/j.jbiotec.2015.09.018. Epub 2015 Sep 21.

Authors

Yan-Lue Lim¹, Robson Ee¹, Delicia Yong¹, Kok-Keng Tee², Wai-Fong Yin¹, Kok-Gan Chan³

Affiliations

¹ Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.
² Department of Medicine, Faculty of Medicine, University of Malaya, 50603 Kuala Lumpur, Malaysia.
³ Division of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia. Electronic address: [email protected].

PMID: 26393955
DOI: 10.1016/j.jbiotec.2015.09.018

Abstract

Pandoraea pnomenusa RB-38 is a bacterium isolated from a former sanitary landfill site. Here, we present the complete genome of P. pnomenusa RB38 in which an oxalate utilization pathway was identified. The genome analysis suggested the potential of this strain as an effective biocontrol agent against oxalate-producing phytopathogens.

Keywords: Biotechnology; Complete genome; Oxalate; Pandoraea pnomenusa.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Burkholderiaceae / genetics*
Burkholderiaceae / isolation & purification*
DNA, Bacterial / analysis
DNA, Bacterial / genetics
Environmental Microbiology
Genome, Bacterial / genetics*
Solid Waste
Waste Disposal Facilities

Substances

DNA, Bacterial
Solid Waste

Associated data

GENBANK/CP007506