Hierarchical-Multiplex DNA Patterns Mediated by Polymer Brush Nanocone Arrays That Possess Potential Application for Specific DNA Sensing

ACS Appl Mater Interfaces. 2015 Nov 11;7(44):24760-71. doi: 10.1021/acsami.5b07577. Epub 2015 Nov 2.

Abstract

This paper provides a facile and cost-efficient method to prepare single-strand DNA (ssDNA) nanocone arrays and hierarchical DNA patterns that were mediated by poly(2-hydroxyethyl methacrylate) (PHEMA) brush. The PHEMA brush nanocone arrays with different morphology and period were fabricated via colloidal lithography. The hierarchical structure was prepared through the combination of colloidal lithography and traditional photolithography. The DNA patterns were easily achieved via grafting the amino group modified ssDNA onto the side chain of polymer brush, and the anchored DNA maintained their reactivity. The as-prepared ssDNA nanocone arrays can be applied for target DNA sensing with the detection limit reaching 1.65 nM. Besides, with the help of introducing microfluidic ideology, the hierarchical-multiplex DNA patterns on the same substrate could be easily achieved with each kind of pattern possessing one kind of ssDNA, which are promising surfaces for the preparation of rapid, visible, and multiplex DNA sensors.

Keywords: DNA patterns; hierarchical-multiplex; nanocone arrays; polymer brush; sensing.

MeSH terms

  • Biosensing Techniques / methods*
  • Colloids / chemistry
  • DNA / chemistry*
  • DNA, Single-Stranded / chemistry
  • Macromolecular Substances / chemistry
  • Microfluidics
  • Microscopy, Atomic Force
  • Microscopy, Electron, Scanning
  • Microscopy, Fluorescence
  • Nanoparticles / chemistry
  • Oligonucleotide Array Sequence Analysis
  • Polyhydroxyethyl Methacrylate / chemistry
  • Polymers / chemistry*
  • Silicon / chemistry
  • Surface Properties

Substances

  • Colloids
  • DNA, Single-Stranded
  • Macromolecular Substances
  • Polymers
  • Polyhydroxyethyl Methacrylate
  • DNA
  • Silicon