Molecular rationale delineating the role of lycopene as a potent HMG-CoA reductase inhibitor: in vitro and in silico study

Nat Prod Res. 2016 Sep;30(18):2111-4. doi: 10.1080/14786419.2015.1108977. Epub 2015 Nov 7.

Abstract

This study initially aimed to depict the molecular rationale evolving the role of lycopene in inhibiting the enzymatic activity of β-hydroxy-β-methylglutaryl-CoA (HMG-CoA) reductase via in vitro and in silico analysis. Our results illustrated that lycopene exhibited strong HMG-CoA reductase inhibitory activity (IC50 value of 36 ng/ml) quite better than pravastatin (IC50 = 42 ng/ml) and strong DPPH free radical scavenging activity (IC50 value = 4.57 ± 0.23 μg/ml) as compared to ascorbic acid (IC50 value = 9.82 ± 0.42 μg/ml). Moreover, the Ki value of lycopene (36 ng/ml) depicted via Dixon plot was well concurred with an IC50 value of 36 ± 1.8 ng/ml. Moreover, molecular informatics study showed that lycopene exhibited binding energy of -5.62 kcal/mol indicating high affinity for HMG-CoA reductase than HMG-CoA (ΔG: -5.34 kcal/mol). Thus, in silico data clearly demonstrate and support the in vitro results that lycopene competitively inhibit HMG-CoA reductase activity by binding at the hydrophobic portion of HMG-CoA reductase.

Keywords: HMG-CoA reductase; Lycopene; antioxidant; hyperlipidemia.

MeSH terms

  • Animals
  • Antioxidants / pharmacology
  • Ascorbic Acid / pharmacology
  • Biphenyl Compounds / chemistry
  • Carotenoids / pharmacology*
  • Computer Simulation
  • Free Radical Scavengers / pharmacology
  • Hydroxymethylglutaryl-CoA Reductase Inhibitors / pharmacology*
  • Hypolipidemic Agents / pharmacology
  • Informatics
  • Lycopene
  • Picrates / chemistry
  • Pravastatin / pharmacology

Substances

  • Antioxidants
  • Biphenyl Compounds
  • Free Radical Scavengers
  • Hydroxymethylglutaryl-CoA Reductase Inhibitors
  • Hypolipidemic Agents
  • Picrates
  • Carotenoids
  • 1,1-diphenyl-2-picrylhydrazyl
  • Pravastatin
  • Ascorbic Acid
  • Lycopene