Streptomyces formicae sp. nov., a novel actinomycete isolated from the head of Camponotus japonicus Mayr

Antonie Van Leeuwenhoek. 2016 Feb;109(2):253-61. doi: 10.1007/s10482-015-0628-7. Epub 2015 Nov 25.

Abstract

During a screening for novel and biotechnologically useful actinobacteria in insects, a novel actinomycete with antifungal activity, designated strain 1H-GS9(T), was isolated from the head of a Camponotus japonicus Mayr ant, which were collected from Northeast Agricultural University (Harbin, Heilongjiang, China). Strain 1H-GS9(T) was characterised using a polyphasic approach. The organism was found to have morphological and chemotaxonomic characteristics typical of members of the genus Streptomyces. 16S rRNA gene sequence similarity studies showed that strain 1H-GS9(T) belongs to the genus Streptomyces with high sequence similarities to Streptomyces scopuliridis DSM 41917(T) (98.8 %) and Streptomyces mauvecolor JCM 5002(T) (98.6 %). However, phylogenetic analysis based on the 16S rRNA gene sequence indicated that it forms a monophyletic clade with Streptomyces kurssanovii JCM 4388(T) (98.6 %), Streptomyces xantholiticus JCM 4282(T) (98.6 %) and Streptomyces peucetius JCM 9920(T) (98.5 %). Thus, a combination of DNA-DNA hybridization experiments and phenotypic tests were carried out between strain 1H-GS9(T) and the above-mentioned five strains, which further clarified their relatedness and demonstrated that strain 1H-GS9(T) could be distinguished from these strains. Therefore, the strain is concluded to represent a novel species of the genus Streptomyces, for which the name Streptomyces formicae sp. nov. is proposed. The type strain is 1H-GS9(T) (=CGMCC 4.7277(T) = DSM 100524(T)).

Keywords: 16S rRNA gene; Antifungal activity; Camponotus japonicus Mayr; Polyphasic taxonomy; Streptomyces formicae sp. nov..

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Ants / microbiology*
  • China
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Fatty Acids / chemistry
  • Fatty Acids / metabolism
  • Head / microbiology
  • Molecular Sequence Data
  • Phylogeny
  • Streptomyces / classification
  • Streptomyces / genetics
  • Streptomyces / isolation & purification*

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids