Substrate-Induced Dimerization of Engineered Monomeric Variants of Triosephosphate Isomerase from Trichomonas vaginalis

PLoS One. 2015 Nov 30;10(11):e0141747. doi: 10.1371/journal.pone.0141747. eCollection 2015.

Abstract

The dimeric nature of triosephosphate isomerases (TIMs) is maintained by an extensive surface area interface of more than 1600 Å2. TIMs from Trichomonas vaginalis (TvTIM) are held in their dimeric state by two mechanisms: a ball and socket interaction of residue 45 of one subunit that fits into the hydrophobic pocket of the complementary subunit and by swapping of loop 3 between subunits. TvTIMs differ from other TIMs in their unfolding energetics. In TvTIMs the energy necessary to unfold a monomer is greater than the energy necessary to dissociate the dimer. Herein we found that the character of residue I45 controls the dimer-monomer equilibrium in TvTIMs. Unfolding experiments employing monomeric and dimeric mutants led us to conclude that dimeric TvTIMs unfold following a four state model denaturation process whereas monomeric TvTIMs follow a three state model. In contrast to other monomeric TIMs, monomeric variants of TvTIM1 are stable and unexpectedly one of them (I45A) is only 29-fold less active than wild-type TvTIM1. The high enzymatic activity of monomeric TvTIMs contrast with the marginal catalytic activity of diverse monomeric TIMs variants. The stability of the monomeric variants of TvTIM1 and the use of cross-linking and analytical ultracentrifugation experiments permit us to understand the differences between the catalytic activities of TvTIMs and other marginally active monomeric TIMs. As TvTIMs do not unfold upon dimer dissociation, herein we found that the high enzymatic activity of monomeric TvTIM variants is explained by the formation of catalytic dimeric competent species assisted by substrate binding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Catalytic Domain
  • Enzyme Stability
  • Molecular Sequence Data
  • Protein Binding
  • Protein Multimerization*
  • Protozoan Proteins / chemistry*
  • Protozoan Proteins / metabolism
  • Trichomonas vaginalis / enzymology*
  • Triose-Phosphate Isomerase / chemistry*
  • Triose-Phosphate Isomerase / metabolism

Substances

  • Protozoan Proteins
  • Triose-Phosphate Isomerase

Associated data

  • PDB/4O4V
  • PDB/4O4W
  • PDB/4O50
  • PDB/4O52
  • PDB/4O53
  • PDB/4O54
  • PDB/4O57

Grants and funding

Support was provided by funding from research and graduate studies coordination from the National Polytechnic Institute [http://www.sip.ipn.mx/Paginas/Principal.aspx] (SIP-IPN grant 20140317) and the Secretary of Economy - Mexican National Council of Science [www.conacyt.mx/] (SE-CONACYT grant 216767) to CGB. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.