Association of the HLA-G 3'UTR polymorphisms with colorectal cancer in Italy: a first insight

Int J Immunogenet. 2016 Feb;43(1):32-9. doi: 10.1111/iji.12243. Epub 2015 Dec 21.

Abstract

This study aimed to explore functional and regulatory polymorphisms and haplotypes at the HLA-G 3'UTR region in colorectal cancer development. The presence of nonpolymorphic variants was also evaluated. Three-hundred and eight patients with colorectal cancer and 294 healthy controls were analysed at the germinal level. We found an association with increased risk of colorectal cancer for +2960 14-bp INDEL, +3196 C>G SNPs and UTR-2 haplotype, and a 'protective' role for +3003 T>C, +3010 C>G polymorphisms and UTR-4 haplotype. We detected in 3 distinct patients, a novel nucleotide change (+3037 C>A) and 2 already described rare variants, +3032 G/C (EUR MAF = 0.1%) and +3092 G/T (EUR MAF = 0%). This is the first study showing associations between different polymorphisms in the HLA-G 3'UTR and colorectal cancer susceptibility.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions / genetics
  • Adult
  • Aged
  • Alleles
  • Colorectal Neoplasms / genetics*
  • Colorectal Neoplasms / pathology
  • Female
  • Genetic Association Studies*
  • Genetic Predisposition to Disease
  • HLA-G Antigens / genetics*
  • Haplotypes
  • Humans
  • Italy
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide / genetics

Substances

  • 3' Untranslated Regions
  • HLA-G Antigens

Associated data

  • GENBANK/KP090034