Expression, purification and biochemical characterization of a family 6 carboxylesterase from Methylococcus capsulatus (bath)

Protein Expr Purif. 2016 Jun:122:31-7. doi: 10.1016/j.pep.2016.02.007. Epub 2016 Feb 18.

Abstract

The genome of Methylococcus capsulatus (bath) encodes a protein R-est6 that is annotated as a lipase family 3 protein. The phylogenetic and the sequence analyses linked this protein to the family 6 carboxylesterase. The gene encoding R-est6 was cloned and overexpressed in Escherichia coli and the recombinant 6x-His tagged protein was purified by Ni-NTA affinity chromatography. The buffers used in the purification were modified by adding 1% glycerol instead of the salt to prevent the protein aggregation. Far UV-CD spectrum and gel filtration chromatography of the purified R-est6 confirmed that the protein was well folded like a typical α/β hydrolase and had the quaternary structure of a tetramer, in addition to a compact monomer. The optimum pH was in the range of 7.0-9.0 and the optimum temperature was at 55 °C for the hydrolysis of pNP-butyrate. As expected, being a member of the family 6 carboxylesterase, R-est6 hydrolyzed triglycerides, pNP esters of the small and the medium fatty acid chain esters and an aryl ester-phenyl acetate. However, R-est6 was also found to hydrolyze the long-chain fatty acid ester which had never been reported for the family 6 carboxylesterase. Additionally, R-est6 was stable and active in the different water-miscible organic solvents. Therefore, the broad substrate range and the structural stability of R-est6 would be advantageous for its application in industrial processes.

Keywords: Family 6 carboxylesterase; Lipase family 3 protein; R-est6; Triglycerides; α/β hydrolase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Carboxylesterase / chemistry
  • Carboxylesterase / genetics*
  • Carboxylesterase / metabolism
  • Cloning, Molecular
  • Enzyme Stability
  • Escherichia coli / genetics
  • Methylococcus capsulatus / chemistry
  • Methylococcus capsulatus / enzymology*
  • Methylococcus capsulatus / genetics*
  • Methylococcus capsulatus / metabolism
  • Phylogeny
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Alignment
  • Substrate Specificity

Substances

  • Recombinant Proteins
  • Carboxylesterase