The schizophrenia risk gene MIR137 acts as a hippocampal gene network node orchestrating the expression of genes relevant to nervous system development and function

Prog Neuropsychopharmacol Biol Psychiatry. 2017 Feb 6:73:109-118. doi: 10.1016/j.pnpbp.2016.02.009. Epub 2016 Feb 27.

Abstract

MicroRNAs (miRs) are small regulatory molecules, which orchestrate neuronal development and plasticity through modulation of complex gene networks. MicroRNA-137 (miR-137) is a brain-enriched RNA with a critical role in regulating brain development and in mediating synaptic plasticity. Importantly, mutations in this miR are associated with the pathoetiology of schizophrenia (SZ), and there is a widespread assumption that disruptions in miR-137 expression lead to aberrant expression of gene regulatory networks associated with SZ. To systematically identify the mRNA targets for this miR, we performed miR-137 gain- and loss-of-function experiments in primary rat hippocampal neurons and profiled differentially expressed mRNAs through next-generation sequencing. We identified 500 genes that were bidirectionally activated or repressed in their expression by the modulation of miR-137 levels. Gene ontology analysis using two independent software resources suggested functions for these miR-137-regulated genes in neurodevelopmental processes, neuronal maturation processes and cell maintenance, all of which known to be critical for proper brain circuitry formation. Since many of the putative miR-137 targets identified here also have been previously shown to be associated with SZ, we propose that this miR acts as a critical gene network hub contributing to the pathophysiology of this neurodevelopmental disorder.

Keywords: Gene network; MicroRNA; Neurodevelopment.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cells, Cultured
  • Embryo, Mammalian
  • Gene Expression Regulation, Developmental / genetics*
  • Gene Ontology
  • Gene Regulatory Networks / genetics
  • HEK293 Cells
  • Hippocampus / cytology
  • Hippocampus / metabolism*
  • Humans
  • MicroRNAs / genetics*
  • MicroRNAs / metabolism
  • Nervous System* / growth & development
  • Nervous System* / metabolism
  • Nervous System* / pathology
  • Neurons / metabolism
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Rats
  • Rats, Wistar
  • Schizophrenia / genetics*
  • Transfection

Substances

  • MIRN137 microRNA, human
  • MicroRNAs
  • RNA, Messenger