Identification and expression of a new Ly6 gene cluster in zebrafish Danio rerio, with implications of being involved in embryonic immunity

Fish Shellfish Immunol. 2016 Jul:54:230-40. doi: 10.1016/j.fsi.2016.04.005. Epub 2016 Apr 9.

Abstract

Lymphocyte antigen-6 (Ly6) superfamily is a large family of proteins and characterized by precisely spaced cysteine motifs, termed the three-finger fold. To date, a large number of members of the Ly6/uPAR family were identified among many species. In this study, we first report the identification and characterization of the secreted Ly2.1-3 proteins on the chromosome 2 in zebrafish and determine the expression pattern. Ly2.1-3 all possess a conserved LU domain and adopt similar three-finger structure with human CD59, SLURP1 and other Ly6 family members. Ly2.1-3 cluster on chromosome 2 and share high homology, possibly originated from chromosomal gene duplication. Ly2.1-3 exhibit distinct expression pattern in the endoderm, they were found abundantly and specifically in the digestive tract, liver and pancreas respectively. The differential expression pattern may suggest Ly2.1-3 acquire new function during gene duplication. The expression level of Ly2.1-3 were up-regulating challenged with LPS indicated that they have a role in innate immune responses of the digestive system during endotoxin challenge in early stage.

Keywords: Digestive system; Immunity; LPS; Ly6 superfamily; Zebrafish.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antigens, Ly / genetics*
  • Antigens, Ly / metabolism
  • Embryo, Nonmammalian / immunology
  • Gene Expression Regulation, Developmental*
  • Immunity, Innate*
  • Multigene Family*
  • Protein Conformation
  • Sequence Alignment / veterinary
  • Zebrafish / embryology
  • Zebrafish / genetics*
  • Zebrafish / immunology
  • Zebrafish Proteins / genetics*
  • Zebrafish Proteins / metabolism

Substances

  • Antigens, Ly
  • Zebrafish Proteins