Biochemical characterization of an isoform of GDP-D-mannose-4,6-dehydratase from Mortierella alpina

Biotechnol Lett. 2016 Oct;38(10):1761-8. doi: 10.1007/s10529-016-2153-9. Epub 2016 Jul 9.

Abstract

Objective: To clarify the molecular mechanism of GDP-L-fucose biosynthesis in Mortierella alpina.

Results: Analysis of the M. alpina genome suggests that there were two isofunctional GDP-D-mannose-4,6-dehydratase genes (GMD1 and GMD2) that have never been found in a microorganism before. GMD2 was expressed heterologously in Escherichia coli and purified to homogeneity. The addition of exogenous NAD(+) or NADP(+) was not essential for GMD2 activity. GMD2 may have considerable importance for GDP-L-fucose biosynthesis under nitrogen starvation. The transcriptional regulation of GMD1 may be more susceptible to GDP and GTP than that of GMD2. Significant changes were observed in the concentration of GDP-L-fucose (30 and 36 % inhibition respectively) and total fatty acids (18 and 12 % inhibition respectively) in M. alpina grown on GMD inhibitors medium, which suggests that GDP-L-fucose is functionally significant in lipid metabolism.

Conclusions: This is the first time that an isofunctional GDP-D-mannose-4,6-dehydratase has been characterized in a microorganism.

Keywords: Characterization; De novo pathway; GDP-D-mannose-4,6-dehydratase; GDP-L-fucose; Isoform; Mortierella alpina.

MeSH terms

  • Cloning, Molecular / methods*
  • Escherichia coli / genetics
  • Fungal Proteins / genetics
  • Fungal Proteins / isolation & purification
  • Fungal Proteins / metabolism
  • Gene Expression Regulation, Enzymologic
  • Gene Expression Regulation, Fungal
  • Genome, Fungal
  • Guanosine Diphosphate Fucose / biosynthesis*
  • Hydro-Lyases / genetics*
  • Hydro-Lyases / isolation & purification
  • Hydro-Lyases / metabolism*
  • Isoenzymes / genetics
  • Isoenzymes / isolation & purification
  • Isoenzymes / metabolism
  • Lipid Metabolism
  • Mortierella / enzymology*
  • Mortierella / genetics
  • Nitrogen / metabolism

Substances

  • Fungal Proteins
  • Isoenzymes
  • Guanosine Diphosphate Fucose
  • Hydro-Lyases
  • GDPmannose 4,6-dehydratase
  • Nitrogen