Chromatin recruitment of activated AMPK drives fasting response genes co-controlled by GR and PPARα

Nucleic Acids Res. 2016 Dec 15;44(22):10539-10553. doi: 10.1093/nar/gkw742. Epub 2016 Aug 30.

Abstract

Adaptation to fasting involves both Glucocorticoid Receptor (GRα) and Peroxisome Proliferator-Activated Receptor α (PPARα) activation. Given both receptors can physically interact we investigated the possibility of a genome-wide cross-talk between activated GR and PPARα, using ChIP- and RNA-seq in primary hepatocytes. Our data reveal extensive chromatin co-localization of both factors with cooperative induction of genes controlling lipid/glucose metabolism. Key GR/PPAR co-controlled genes switched from transcriptional antagonism to cooperativity when moving from short to prolonged hepatocyte fasting, a phenomenon coinciding with gene promoter recruitment of phosphorylated AMP-activated protein kinase (AMPK) and blocked by its pharmacological inhibition. In vitro interaction studies support trimeric complex formation between GR, PPARα and phospho-AMPK. Long-term fasting in mice showed enhanced phosphorylation of liver AMPK and GRα Ser211. Phospho-AMPK chromatin recruitment at liver target genes, observed upon prolonged fasting in mice, is dampened by refeeding. Taken together, our results identify phospho-AMPK as a molecular switch able to cooperate with nuclear receptors at the chromatin level and reveal a novel adaptation mechanism to prolonged fasting.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenylate Kinase / metabolism*
  • Animals
  • Base Sequence
  • Binding Sites
  • Cells, Cultured
  • Chromatin / metabolism*
  • Enhancer Elements, Genetic
  • Fasting
  • Hepatocytes / metabolism
  • Lipid Metabolism
  • Mice, Inbred C57BL
  • Mice, Knockout
  • PPAR alpha / physiology*
  • Protein Transport
  • Receptors, Glucocorticoid / physiology*
  • Sequence Analysis, DNA
  • Transcriptional Activation
  • Transcriptome

Substances

  • Chromatin
  • PPAR alpha
  • Receptors, Glucocorticoid
  • Adenylate Kinase