Conformational Restriction of Peptides Using Dithiol Bis-Alkylation

Methods Enzymol. 2016:580:303-32. doi: 10.1016/bs.mie.2016.05.035. Epub 2016 Jun 24.

Abstract

Macrocyclic peptides are highly promising as inhibitors of protein-protein interactions. While many bond-forming reactions can be used to make cyclic peptides, most have limitations that make this chemical space challenging to access. Recently, a variety of cysteine alkylation reactions have been used in rational design and library approaches for cyclic peptide discovery and development. We and others have found that this chemistry is versatile and robust enough to produce a large variety of conformationally constrained cyclic peptides. In this chapter, we describe applications, methods, mechanistic insights, and troubleshooting for dithiol bis-alkylation reactions for the production of cyclic peptides. This method for efficient solution-phase macrocyclization is highly useful for the rapid production and screening of loop-based inhibitors of protein-protein interactions.

Keywords: Cyclic peptides; Loops; Peptide design; Peptide synthesis; Protein–protein interactions.

MeSH terms

  • Alkylation
  • Cysteine / chemistry
  • Peptides, Cyclic / chemical synthesis
  • Peptides, Cyclic / chemistry*
  • Protein Conformation*
  • Protein Engineering / methods*
  • Protein Interaction Mapping / methods*

Substances

  • Peptides, Cyclic
  • Cysteine