Development of a Bacillus subtilis cell-free transcription-translation system for prototyping regulatory elements

Metab Eng. 2016 Nov:38:370-381. doi: 10.1016/j.ymben.2016.09.008. Epub 2016 Sep 30.

Abstract

Cell-free transcription-translation systems were originally applied towards in vitro protein production. More recently, synthetic biology is enabling these systems to be used within a systematic design context for prototyping DNA regulatory elements, genetic logic circuits and biosynthetic pathways. The Gram-positive soil bacterium, Bacillus subtilis, is an established model organism of industrial importance. To this end, we developed several B. subtilis-based cell-free systems. Our improved B. subtilis WB800N-based system was capable of producing 0.8µM GFP, which gave a ~72x fold-improvement when compared with a B. subtilis 168 cell-free system. Our improved system was applied towards the prototyping of a B. subtilis promoter library in which we engineered several promoters, derived from the wild-type Pgrac (σA) promoter, that display a range of comparable in vitro and in vivo transcriptional activities. Additionally, we demonstrate the cell-free characterisation of an inducible expression system, and the activity of a model enzyme - renilla luciferase.

Keywords: Bacillus subtilis; Cell-free transcription-translation; Luciferase assay; Promoter library; Regulatory element prototyping; Synthetic biology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus subtilis / genetics*
  • Bacterial Proteins / biosynthesis*
  • Bacterial Proteins / genetics*
  • Cell-Free System / physiology
  • Gene Expression Regulation, Bacterial / genetics
  • Genetic Enhancement / methods
  • Metabolic Engineering / methods
  • Metabolic Networks and Pathways / genetics
  • Protein Biosynthesis / genetics*
  • Regulatory Elements, Transcriptional / genetics*
  • Transcription, Genetic / genetics*

Substances

  • Bacterial Proteins