Molecular diagnosis of bloodstream infections in onco-haematology patients with PCR/ESI-MS technology

J Infect. 2017 Feb;74(2):187-194. doi: 10.1016/j.jinf.2016.11.011. Epub 2016 Nov 23.

Abstract

Objectives: Onco-haematological patients are prone to develop infections, and antibiotic prophylaxis may lead to negative blood cultures. Thus, the microbiological diagnosis and subsequent administration of a targeted antimicrobial therapy is often difficult. The goal of this study was to evaluate the usefulness of IRIDICA (PCR/ESI-MS technology) for the molecular diagnosis of bloodstream infections in this patient group.

Methods: A total of 463 whole blood specimens from different sepsis episodes in 429 patients were analysed using the PCR/ESI-MS platform, comparing the results with those of blood culture and other clinically relevant information.

Results: The sensitivity of PCR/ESI-MS by specimen (excluding polymicrobial infections, n = 25) in comparison with blood culture was 64.3% overall, 69.0% in oncological patients, and 59.3% in haematological patients. When comparing with a clinical infection criterion, overall sensitivity rose to 74.7%, being higher in oncological patients (80.0%) than in haematological patients (67.7%). Thirty-one microorganisms isolated by culture were not detected by IRIDICA, whereas 42 clinically relevant pathogens not isolated by culture were detected moleculary.

Conclusions: PCR/ESI-MS offers a reliable identification of pathogens directly from whole blood. While additional studies are needed to confirm our findings, the system showed a lower sensitivity in onco-haematological patients in comparison with previously reported results in patients from the Intensive Care Unit.

Keywords: Bloodstream infection; Haematology; Molecular diagnosis; Oncology; PCR/ESI-MS.

Publication types

  • Observational Study

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Bacteremia / complications
  • Bacteremia / diagnosis
  • Bacteremia / microbiology
  • Female
  • Hematologic Neoplasms / complications*
  • Humans
  • Intensive Care Units
  • Male
  • Middle Aged
  • Molecular Diagnostic Techniques* / instrumentation
  • Molecular Diagnostic Techniques* / methods
  • Polymerase Chain Reaction*
  • Prospective Studies
  • Sensitivity and Specificity
  • Sepsis / complications
  • Sepsis / diagnosis*
  • Sepsis / microbiology
  • Spectrometry, Mass, Electrospray Ionization* / instrumentation
  • Spectrometry, Mass, Electrospray Ionization* / methods
  • Young Adult