A marsupial phosphoglycerate kinase (PGK) processed pseudogene

Genomics. 1989 Aug;5(2):264-9. doi: 10.1016/0888-7543(89)90056-6.

Abstract

A clone that cross-hybridized with a full-length human cDNA PGK probe was isolated from a hill kangaroo (Macropus robustus: Marsupialia) lambda EMBL4 EcoRI genomic library. The clone was sequenced and demonstrated to be a pseudogene, with two deletions (one of 3 bases, the other 24 bases long), one single base insertion, and a nonsense mutation with respect to the functional human X-linked gene. It is flanked by terminal repeats in the 5' and 3' noncoding regions, but it has no 3' poly(A) remnant. The 3' untranslated region has a 34-bp sequence, with 29 bp homologous to the human 3' untranslated region. The overall percentage homology with the mouse and human X-linked PGK indicates that this pseudogene is probably more closely related to eutherian X-linked PGK genes than to the autosomal form. The results also suggest that pseudogenes are of considerable antiquity (greater than 100 MYr) in the mammalian lineage.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Blotting, Southern
  • DNA Probes
  • Humans
  • Macropodidae / genetics*
  • Marsupialia / genetics*
  • Molecular Sequence Data
  • Phosphoglycerate Kinase / genetics*
  • Pseudogenes*
  • Sequence Homology, Nucleic Acid

Substances

  • DNA Probes
  • Phosphoglycerate Kinase

Associated data

  • GENBANK/J03076