Genetic profiling of children with advanced cholestatic liver disease

Clin Genet. 2017 Jul;92(1):52-61. doi: 10.1111/cge.12959. Epub 2017 Mar 17.

Abstract

Advanced cholestatic liver disease is a leading referral to pediatric liver transplant centers. Recent advances in the genetic classification of this group of disorders promise a highly personalized management although the genetic heterogeneity also poses a diagnostic challenge. Using a next-generation sequencing-based multi-gene panel, we performed retrospective analysis of 98 pediatric patients who presented with advanced cholestatic liver disease. A likely causal mutation was identified in the majority (61%), spanning many genes including ones that have only rarely been reported to cause cholestatic liver disease, e.g. TJP2 and VIPAS39. We find no evidence to support mono-allelic phenotypic expression in the carrier parents despite the severe nature of the respective mutations, and no evidence of oligogenicity. The high-carrier frequency of the founder mutations identified in our cohort (1 in 87) suggests a minimum incidence of 1:7246, an alarmingly high disease burden that calls for the primary prevention through carrier screening.

Keywords: cholestasis; personalized medicine; tight-junction; transplant.

MeSH terms

  • Adolescent
  • Child
  • Child, Preschool
  • Cholestasis / diagnosis
  • Cholestasis / enzymology
  • Cholestasis / genetics*
  • Cholestasis / pathology
  • Female
  • Gene Expression Regulation
  • Genetic Predisposition to Disease
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Infant
  • Infant, Newborn
  • Liver Diseases / diagnosis
  • Liver Diseases / enzymology
  • Liver Diseases / genetics*
  • Liver Diseases / pathology
  • Male
  • Mutation
  • Vesicular Transport Proteins / genetics*
  • Young Adult
  • Zonula Occludens-2 Protein / genetics*

Substances

  • TJP2 protein, human
  • VIPAS39 protein, human
  • Vesicular Transport Proteins
  • Zonula Occludens-2 Protein