1H, 13C and 15N backbone and side-chain resonance assignments of the ZnF-UBP domain of USP20/VDU2

Biomol NMR Assign. 2017 Apr;11(1):91-93. doi: 10.1007/s12104-017-9726-y. Epub 2017 Jan 13.

Abstract

Deubiquitinase USP20/VDU2 has been identified as a regulator of multiple proteins including hypoxia-inducible factor (HIF)-1α, β2-adrenergic receptor, and tumor necrosis factor receptor associated factor 6 etc. It contains four structural domains, including an N-terminal zinc-finger ubiquitin binding domain (ZnF-UBP) that potentially helps USP20 to recruit its ubiquitin substrates. Here we report the 1H, 13C and 15N backbone and side-chain resonance assignments of the ZnF-UBP domain of USP20/VDU2. The BMRB accession number is 26901. The secondary structural elements predicted from the NMR data reveal a global fold consisting of three α-helices and four β-strands. The complete assignments can be used to explore the protein dynamics of the USP20 ZnF-UBP and its interactions with monoubiquitin and ubiquitin chains.

Keywords: Deubiquitinase; NMR; USP20; ZnF-UBP domain.

MeSH terms

  • Nuclear Magnetic Resonance, Biomolecular*
  • Protein Domains
  • Ubiquitin / metabolism*
  • Ubiquitin Thiolesterase / chemistry*
  • Ubiquitin Thiolesterase / metabolism*
  • Zinc Fingers*

Substances

  • USP20 protein, human
  • Ubiquitin
  • Ubiquitin Thiolesterase