Clinical implications of DNMT3A mutations in a Southeast Asian cohort of acute myeloid leukaemia patients

J Clin Pathol. 2017 Aug;70(8):669-676. doi: 10.1136/jclinpath-2016-204195. Epub 2017 Jan 18.

Abstract

Aims: In recent years, genomic technologies have enabled the identification of mutations in acute myeloid leukaemia (AML). DNMT3A is a recurrently mutated epigenetic modifier gene in AML. To date, the prognostic significance of DNMT3A mutations has not been studied in a Southeast Asian AML population. We sought to investigate the clinical implications of DNMT3A mutations in a Southeast Asian cohort of AML patients.

Methods: DNMT3A mutations were identified using a targeted next-generation sequencing panel in 157 AML patients. We studied the molecular and clinical features of patients with DNMT3A mutations and assessed the prognostic impact of DNMT3A mutations.

Results: DNMT3A mutations were found in 33 of 157 (21.0%) AML patients. 114 patients were included for statistical analysis. Pretreatment data revealed that patients with DNMT3A mutations were older (≥60 years old), had a higher white blood cell count at diagnosis, had more adverse cytogenetic risk profiles and were more often associated with NPM1 mutations compared with patients with wild-type DNMT3A. Survival analysis showed that DNMT3A mutations were associated with poorer clinical outcomes. This was especially when associated with NPM1 and FLT3-ITD mutations (AML NPM1/FLT3/DNMT3A ), which are common. The AML NPM1/FLT3/DNMT3A subtype was an independent predictor for poorer overall survival (OS). Other independent risk factors for poorer OS include advanced age at diagnosis and adverse cytogenetic risk stratification.

Conclusions: DNMT3A mutations are associated with an unfavourable clinical outcome in our Southeast Asian AML patient cohort. In particular, AML NPM1/FLT3/DNMT3A patients had the poorest prognosis.

Keywords: CANCER RESEARCH; HAEM-ONCOLOGY; diagnostic screening.

MeSH terms

  • Adult
  • Aged
  • Asia, Southeastern / epidemiology
  • Asia, Southeastern / ethnology
  • China / epidemiology
  • China / ethnology
  • DNA (Cytosine-5-)-Methyltransferases / genetics*
  • DNA Methyltransferase 3A
  • Disease-Free Survival
  • Female
  • Humans
  • India / epidemiology
  • India / ethnology
  • Leukemia, Myeloid, Acute / ethnology
  • Leukemia, Myeloid, Acute / genetics*
  • Leukemia, Myeloid, Acute / mortality
  • Male
  • Middle Aged
  • Mutation / genetics*
  • Nucleophosmin
  • Prognosis
  • Retrospective Studies
  • Risk Factors
  • fms-Like Tyrosine Kinase 3 / genetics

Substances

  • DNMT3A protein, human
  • NPM1 protein, human
  • Nucleophosmin
  • DNA (Cytosine-5-)-Methyltransferases
  • DNA Methyltransferase 3A
  • FLT3 protein, human
  • fms-Like Tyrosine Kinase 3