Chemical Reaction Network Theory elucidates sources of multistability in interferon signaling

PLoS Comput Biol. 2017 Apr 3;13(4):e1005454. doi: 10.1371/journal.pcbi.1005454. eCollection 2017 Apr.

Abstract

Bistability has important implications in signaling pathways, since it indicates a potential cell decision between alternative outcomes. We present two approaches developed in the framework of the Chemical Reaction Network Theory for easy and efficient search of multiple steady state behavior in signaling networks (both with and without mass conservation), and apply them to search for sources of bistability at different levels of the interferon signaling pathway. Different type I interferon subtypes and/or doses are known to elicit differential bioactivities (ranging from antiviral, antiproliferative to immunomodulatory activities). How different signaling outcomes can be generated through the same receptor and activating the same JAK/STAT pathway is still an open question. Here, we detect bistability at the level of early STAT signaling, showing how two different cell outcomes are achieved under or above a threshold in ligand dose or ligand-receptor affinity. This finding could contribute to explain the differential signaling (antiviral vs apoptotic) depending on interferon dose and subtype (α vs β) observed in type I interferons.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Communication / physiology*
  • Humans
  • Interferon Type I / metabolism*
  • Janus Kinases / metabolism
  • Protein Interaction Maps / physiology*
  • STAT Transcription Factors / metabolism
  • Signal Transduction / physiology*
  • Systems Biology*

Substances

  • Interferon Type I
  • STAT Transcription Factors
  • Janus Kinases

Grants and funding

We gratefully acknowledge financial support by the European Union FP7 project IFNaction (‘A system view on the differential activities of human type I interferons’; project reference: 223608) to JS. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.