Ternary complex of human RORγ ligand-binding domain, inverse agonist and SMRT peptide shows a unique mechanism of corepressor recruitment

Genes Cells. 2017 Jun;22(6):535-551. doi: 10.1111/gtc.12494. Epub 2017 May 11.

Abstract

Retinoid-related orphan receptor gamma (RORγ) directly controls the differentiation of Th17 cell and the production of interleukin-17, which plays an integral role in autoimmune diseases. To obtain insight into RORγ, we have determined the first crystal structure of a ternary complex containing RORγ ligand-binding domain (LBD) bound with a novel synthetic inhibitor and a repressor peptide, 22-mer peptide from silencing mediator of retinoic acid and thyroid hormone receptor (SMRT). Comparison of a binary complex of nonliganded (apo) RORγ-LBD with a nuclear receptor co-activator (NCoA-1) peptide has shown that our inhibitor displays a unique mechanism different from those caused by natural inhibitor, ursolic acid (UA). The compound unprecedentedly induces indirect disruption of a hydrogen bond between His479 on helix 11 (H11) and Tyr502 on H12, which is crucial for active conformation. This crystallographic study will allow us to develop novel synthetic compounds for autoimmune disease therapy.

MeSH terms

  • Binding Sites
  • Humans
  • Hydrogen Bonding
  • Models, Molecular
  • Mutation
  • Nuclear Receptor Co-Repressor 2 / agonists
  • Nuclear Receptor Co-Repressor 2 / chemistry
  • Nuclear Receptor Co-Repressor 2 / genetics
  • Nuclear Receptor Co-Repressor 2 / metabolism*
  • Nuclear Receptor Coactivator 1 / chemistry
  • Nuclear Receptor Coactivator 1 / genetics
  • Nuclear Receptor Coactivator 1 / metabolism*
  • Nuclear Receptor Subfamily 1, Group F, Member 3 / metabolism*
  • Peptide Fragments
  • Protein Binding
  • Protein Conformation
  • Triterpenes / pharmacology
  • Ursolic Acid

Substances

  • NCOR2 protein, human
  • Nuclear Receptor Co-Repressor 2
  • Nuclear Receptor Subfamily 1, Group F, Member 3
  • Peptide Fragments
  • Triterpenes
  • NCOA1 protein, human
  • Nuclear Receptor Coactivator 1