Direct quantitative measurement of the C═O⋅⋅⋅H-C bond by atomic force microscopy

Sci Adv. 2017 May 12;3(5):e1603258. doi: 10.1126/sciadv.1603258. eCollection 2017 May.

Abstract

The hydrogen atom-the smallest and most abundant atom-is of utmost importance in physics and chemistry. Although many analysis methods have been applied to its study, direct observation of hydrogen atoms in a single molecule remains largely unexplored. We use atomic force microscopy (AFM) to resolve the outermost hydrogen atoms of propellane molecules via very weak C═O⋅⋅⋅H-C hydrogen bonding just before the onset of Pauli repulsion. The direct measurement of the interaction with a hydrogen atom paves the way for the identification of three-dimensional molecules such as DNAs and polymers, building the capabilities of AFM toward quantitative probing of local chemical reactivity.

Keywords: Atomic force microscopy; Hydrogen bond; Molecule.