Tetrazole-Based Probes for Integrated Phenotypic Screening, Affinity-Based Proteome Profiling, and Sensitive Detection of a Cancer Biomarker

Angew Chem Int Ed Engl. 2017 Nov 20;56(47):15044-15048. doi: 10.1002/anie.201709584. Epub 2017 Oct 23.

Abstract

Target-identification phenotypic screening has been a powerful approach in drug discovery; however, it is hindered by difficulties in identifying the underlying cellular targets. To address this challenge, we have combined phenotypic screening of a fully functionalized small-molecule library with competitive affinity-based proteome profiling to map and functionally characterize the targets of screening hits. Using this approach, we identified ANXA2, PDIA3/4, FLAD1, and NOS2 as primary cellular targets of two bioactive molecules that inhibit cancer cell proliferation. We further demonstrated that a panel of probes can label and/or image annexin A2 (a cancer biomarker) from different cancer cell lines, thus providing opportunities for potential cancer diagnosis and therapy.

Keywords: affinity-based probes; cancer biomarkers; phenotypic screening; target identification; tetrazole.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Annexin A2 / metabolism
  • Antineoplastic Agents / chemistry
  • Antineoplastic Agents / pharmacology
  • Biomarkers, Tumor / metabolism*
  • Cell Line, Tumor
  • Cell Proliferation / drug effects
  • Drug Discovery
  • Early Detection of Cancer
  • Flavin-Adenine Dinucleotide / metabolism
  • Humans
  • Ligases / metabolism
  • Limit of Detection
  • MCF-7 Cells
  • Molecular Probes / chemistry*
  • Nitric Oxide Synthase Type II / metabolism
  • Phenotype
  • Protein Disulfide-Isomerases / metabolism
  • Proteome*
  • Tetrazoles / chemistry*

Substances

  • ANXA2 protein, human
  • Annexin A2
  • Antineoplastic Agents
  • Biomarkers, Tumor
  • Molecular Probes
  • Proteome
  • Tetrazoles
  • Flavin-Adenine Dinucleotide
  • NOS2 protein, human
  • Nitric Oxide Synthase Type II
  • PDIA4 protein, human
  • Protein Disulfide-Isomerases
  • PDIA3 protein, human
  • Ligases