Solution Structure and Membrane Interaction of the Cytoplasmic Tail of HIV-1 gp41 Protein

Structure. 2017 Nov 7;25(11):1708-1718.e5. doi: 10.1016/j.str.2017.09.010. Epub 2017 Oct 19.

Abstract

The cytoplasmic tail of gp41 (gp41CT) remains the last HIV-1 domain with an unknown structure. It plays important roles in HIV-1 replication such as mediating envelope (Env) intracellular trafficking and incorporation into assembling virions, mechanisms of which are poorly understood. Here, we present the solution structure of gp41CT in a micellar environment and characterize its interaction with the membrane. We show that the N-terminal 45 residues are unstructured and not associated with the membrane. However, the C-terminal 105 residues form three membrane-bound amphipathic α helices with distinctive structural features such as variable degree of membrane penetration, hydrophobic and basic surfaces, clusters of aromatic residues, and a network of cation-π interactions. This work fills a major gap by providing the structure of the last segment of HIV-1 Env, which will provide insights into the mechanisms of Gag-mediated Env incorporation as well as the overall Env mobility and conformation on the virion surface.

Keywords: Gag polyprotein; HIV-1; NMR; bicelles; cytoplasmic tail; envelope protein; gp41; matrix protein; membrane; micelles.

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Cloning, Molecular
  • Dimyristoylphosphatidylcholine / chemistry
  • Dimyristoylphosphatidylcholine / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Genetic Vectors / chemistry
  • Genetic Vectors / metabolism
  • HIV Envelope Protein gp41 / chemistry*
  • HIV Envelope Protein gp41 / genetics
  • HIV Envelope Protein gp41 / metabolism
  • HIV-1 / chemistry*
  • Hydrophobic and Hydrophilic Interactions
  • Lipid Bilayers / chemistry*
  • Lipid Bilayers / metabolism
  • Micelles
  • Models, Molecular
  • Nuclear Magnetic Resonance, Biomolecular
  • Phospholipid Ethers / chemistry
  • Phospholipid Ethers / metabolism
  • Protein Binding
  • Protein Conformation, alpha-Helical
  • Protein Interaction Domains and Motifs
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Sequence Alignment
  • Thermodynamics
  • Virion / chemistry*

Substances

  • 1,2-dihexadecyl-sn-glycero-3-phosphocholine
  • HIV Envelope Protein gp41
  • Lipid Bilayers
  • Micelles
  • Phospholipid Ethers
  • Recombinant Proteins
  • gp41 protein, Human immunodeficiency virus 1
  • Dimyristoylphosphatidylcholine