Evolutionary Context of Non-Sorbitol-Fermenting Shiga Toxin-Producing Escherichia coli O55:H7

Emerg Infect Dis. 2017 Dec;23(12):1966-1973. doi: 10.3201/eid2312.170628.

Abstract

In July 2014, an outbreak of Shiga toxin-producing Escherichia coli (STEC) O55:H7 in England involved 31 patients, 13 (42%) of whom had hemolytic uremic syndrome. Isolates were sequenced, and the sequences were compared with publicly available sequences of E. coli O55:H7 and O157:H7. A core-genome phylogeny of the evolutionary history of the STEC O55:H7 outbreak strain revealed that the most parsimonious model was a progenitor enteropathogenic O55:H7 sorbitol-fermenting strain, lysogenized by a Shiga toxin (Stx) 2a-encoding phage, followed by loss of the ability to ferment sorbitol because of a non-sense mutation in srlA. The parallel, convergent evolutionary histories of STEC O157:H7 and STEC O55:H7 may indicate a common driver in the evolutionary process. Because emergence of STEC O157:H7 as a clinically significant pathogen was associated with acquisition of the Stx2a-encoding phage, the emergence of STEC O55:H7 harboring the stx2a gene is of public health concern.

Keywords: England; Ireland; STEC O55:H7; Shiga toxin–producing Escherichia coli serotype; bacteria; evolution; outbreak; virulence; whole-genome sequencing; zoonoses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • Coliphages / genetics
  • Coliphages / metabolism
  • Disease Outbreaks*
  • Escherichia coli Infections / epidemiology*
  • Escherichia coli Infections / microbiology
  • Escherichia coli Infections / pathology
  • Escherichia coli Infections / transmission
  • Evolution, Molecular
  • Fermentation
  • Gene Deletion
  • Gene Expression
  • Genome, Bacterial*
  • Hemolytic-Uremic Syndrome / epidemiology*
  • Hemolytic-Uremic Syndrome / microbiology
  • Hemolytic-Uremic Syndrome / pathology
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Lysogeny
  • Phylogeny
  • Shiga Toxin 2 / biosynthesis*
  • Shiga-Toxigenic Escherichia coli / classification
  • Shiga-Toxigenic Escherichia coli / genetics*
  • Shiga-Toxigenic Escherichia coli / isolation & purification
  • Shiga-Toxigenic Escherichia coli / virology
  • Sorbitol / metabolism
  • United Kingdom / epidemiology

Substances

  • Bacterial Proteins
  • Shiga Toxin 2
  • Sorbitol