Real time PCR to evaluate HSV-2 shedding from anal and genital samples among men who have sex with men, living with HIV

J Med Virol. 2018 Apr;90(4):745-752. doi: 10.1002/jmv.25003. Epub 2018 Jan 18.

Abstract

This study shows the relative quantification of HSV-2 by qPCR, using the MIQE Guidelines. The reaction efficiency was evaluated, and the relative quantification used the R = 2-ΔCq method. The relative quantification of HSV-2 was conducted with anal and genital samples from men who have sex with men (MSM), living with HIV. The presence of a single amplification product was validated with a dissociation curves profile and the determination of the melting temperature. The limit of detection for β-globin was determined as 3.3 × 10-5 ng/μL, and for HSV-2 at 6.0 × 10-6 ng/μL. The efficiency for β-globin was 100.2% and for HSV-2 was 106.8%. From 336 MSM, 2.1% and 3.9% individuals presented anal or genital HSV-2 shedding, respectively. The HSV-2 viral load was 9.2 RU, individuals with fewer CD4+ presented higher HSV-2 viral load. The qPCR method is reproducible and has optimal reaction efficiency.

Keywords: herpes genitalis; human herpesvirus 2; real-time polymerase chain reaction; reproducibility of results.

Publication types

  • Evaluation Study

MeSH terms

  • Adult
  • Anal Canal / virology*
  • Genitalia, Male / virology*
  • HIV Infections / complications*
  • Herpes Genitalis / virology*
  • Herpesvirus 2, Human / genetics
  • Herpesvirus 2, Human / isolation & purification*
  • Homosexuality, Male
  • Humans
  • Male
  • Real-Time Polymerase Chain Reaction / methods*
  • Reproducibility of Results
  • Sensitivity and Specificity
  • Viral Load / methods
  • Virus Shedding*