Species A rotaviruses isolated from hospitalized patients over 5 years of age in Kolkata, India, in 2012/13

Arch Virol. 2018 Mar;163(3):745-750. doi: 10.1007/s00705-017-3670-0. Epub 2017 Dec 16.

Abstract

In hospital-based diarrhoeal disease surveillance at Infectious Diseases & Beliaghata-General Hospital (May-2012 to April-2013), Kolkata, India, stool samples were collected from patients < 5 years (n = 830) and > 5 years of age (n = 728) hospitalized with diarrhea. Group-A rotavirus (GARV) was identified by ELISA followed by multiplex RT-PCR. In children < 5 years of age, 53.4% of the samples were positive for GARV. In patients > 5 years to 90 years old, only 6.04% (n = 44) tested positive for GARV. G2P[4] strains (n = 16 [36.36%]) were the most prevalent, followed by G9P[4] strains (n = 13 [29.54%]), while P[4]-(n = 30 [68.18%]) was most prevalent among the P genotypes. The GARV strains G2, G9 and P[4] detected in adults clustered together in the phylogenetic tree with the GARV strains identified in children (< 5 years) during the same period. Rotavirus positivity was high among female patients (75%), suggesting that caregivers (mother/grandmother/older-siblings) may get infected through young children or may act as carriers for transmission.

Keywords: India; Kolkata; adults; diarrhea; rotavirus.

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Caregivers / education
  • Child
  • Child, Preschool
  • Diarrhea / diagnosis
  • Diarrhea / epidemiology*
  • Diarrhea / virology
  • Feces / virology
  • Female
  • Genotype*
  • Hospitals
  • Humans
  • India / epidemiology
  • Infant
  • Male
  • Middle Aged
  • Phylogeny*
  • Prevalence
  • Rotavirus / classification
  • Rotavirus / genetics*
  • Rotavirus / isolation & purification
  • Rotavirus Infections / diagnosis
  • Rotavirus Infections / epidemiology*
  • Rotavirus Infections / virology