Genome-Wide Association Approach Identified Novel Genetic Predictors of Heart Rate Response to β-Blockers

J Am Heart Assoc. 2018 Feb 24;7(5):e006463. doi: 10.1161/JAHA.117.006463.

Abstract

Background: For many indications, the negative chronotropic effect of β-blockers is important to their efficacy, yet the heart rate (HR) response to β-blockers varies. Herein, we sought to use a genome-wide association approach to identify novel single nucleotide polymorphisms (SNPs) associated with HR response to β-blockers.

Methods and results: We first performed 4 genome-wide association analyses for HR response to atenolol (a β1-adrenergic receptor blocker) as: (1) monotherapy or (2) add-on therapy, in 426 whites and 273 blacks separately from the PEAR (Pharmacogenomic Evaluation of Antihypertensive Responses) study. A meta-analysis was then performed between the genome-wide association analysis performed in PEAR atenolol monotherapy and add-on therapy, in each race separately, using the inverse variance method assuming fixed effects. From this analysis, SNPs associated with HR response to atenolol at a P<1E-05 were tested for replication in whites (n=200) and blacks (n=168) treated with metoprolol (a β1-adrenergic receptor blocker). From the genome-wide association meta-analyses, SNP rs17117817 near olfactory receptor family10 subfamily-p-member1 (OR10P1), and SNP rs2364349 in sorting nexin-9 (SNX9) replicated in blacks. The combined studies meta-analysis P values for the rs17117817 and rs2364349 reached genome-wide significance (rs17117817G-allele; Meta-β=5.53 beats per minute, Meta-P=2E-09 and rs2364349 A-allele; Meta-β=3.5 beats per minute, Meta-P=1E-08). Additionally, SNPs in the OR10P1 and SNX9 gene regions were also associated with HR response in whites.

Conclusions: This study highlights OR10P1 and SNX9 as novel genes associated with changes in HR in response to β-blockers.

Clinical trial registration: URL: http://www.clinicaltrials.gov. Unique identifier: NCT00246519.

Keywords: atenolol; heart rate; metoprolol; pharmacogenomics; β‐blockers.

Publication types

  • Meta-Analysis
  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adrenergic beta-1 Receptor Antagonists / therapeutic use*
  • Adult
  • Atenolol / therapeutic use*
  • Black or African American / genetics
  • Female
  • Genome-Wide Association Study
  • Genotype
  • Heart Rate / drug effects*
  • Humans
  • Male
  • Middle Aged
  • Pharmacogenetics
  • Pharmacogenomic Variants*
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Randomized Controlled Trials as Topic
  • Receptors, Odorant / genetics*
  • Sorting Nexins / genetics*
  • White People / genetics

Substances

  • Adrenergic beta-1 Receptor Antagonists
  • Receptors, Odorant
  • SNX9 protein, human
  • Sorting Nexins
  • Atenolol

Associated data

  • ClinicalTrials.gov/NCT00246519