Iron-Sulfur Clusters in DNA Polymerases and Primases of Eukaryotes

Methods Enzymol. 2018:599:1-20. doi: 10.1016/bs.mie.2017.09.003. Epub 2017 Dec 6.

Abstract

Research during the past decade witnessed the discovery of [4Fe-4S] clusters in several members of the eukaryotic DNA replication machinery. The presence of clusters was confirmed by UV-visible absorption, electron paramagnetic resonance spectroscopy, and metal analysis for primase and the B-family DNA polymerases δ and ζ. The crystal structure of primase revealed that the [4Fe-4S] cluster is buried inside the protein and fulfills a structural role. Although [4Fe-4S] clusters are firmly established in the C-terminal domains of catalytic subunits of DNA polymerases δ and ζ, no structures are currently available and their precise roles have not been ascertained. The [4Fe-4S] clusters in the polymerases and primase play a structural role ensuring proper protein folding and stability. In DNA polymerases δ and ζ, they can potentially play regulatory role by sensing hurdles during DNA replication and assisting with DNA polymerase switches by oscillation between oxidized-reduced states.

Keywords: B-subunit; Crystal structure; DNA polymerase; DNA replication; Iron–sulfur cluster; Primase.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA Polymerase III / chemistry
  • DNA Polymerase theta
  • DNA Primase / chemistry*
  • DNA Replication
  • DNA-Directed DNA Polymerase / chemistry*
  • Humans
  • Iron / chemistry
  • Iron-Sulfur Proteins / chemistry*
  • Models, Molecular
  • Protein Conformation
  • Sulfur / chemistry

Substances

  • Iron-Sulfur Proteins
  • Sulfur
  • Iron
  • DNA Primase
  • DNA Polymerase III
  • DNA-Directed DNA Polymerase