Analysis of miRNA expression profiling identifies miR-214-3p as a novel biomarker in sinonasal inverted papilloma

Epigenomics. 2018 Dec;10(12):1541-1553. doi: 10.2217/epi-2018-0071. Epub 2018 Jun 28.

Abstract

Aim: To analyze the expression profile, diagnostic and clinicopathological significances of miRNAs in sinonasal inverted papilloma (SNIP).

Materials & methods: The expression profile of miRNAs was analyzed using a miRNA microarray approach. The potential functions and clinical significances of specific miRNAs were further analyzed by bioinformatics and statistical methods.

Results: The microarray assay identified 37 significantly upregulated and 21 downregulated miRNAs in SNIP. Of nine miRNAs randomly selected, the expression levels of seven miRNAs were confirmed by quantitative real-time PCR. The potential target genes of several candidate miRNAs were enriched in some biological processes and cellular signaling pathways related to tumorigenesis. Receiever operating characteristic curve analysis for miR-214-3p indicated an area under the curve of 0.932. Notably, its expression level was significantly decreased in SNIP tissues and associated with SNIP staging and recurrence.

Conclusion: MiR-214-3p can possibly serve as a valuable biomarker and a therapeutic target for SNIP.

Keywords: Human papilloma virus; bioinformatics; biomarker; inverted papilloma; microRNA; microarray; pathogenesis; pathway; sinonasal tumors; target genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Biomarkers, Tumor / genetics*
  • Carcinogenesis
  • Computational Biology
  • Down-Regulation
  • Female
  • Gene Expression Regulation, Neoplastic / genetics*
  • Humans
  • Male
  • MicroRNAs / genetics*
  • Middle Aged
  • Nose Neoplasms / genetics*
  • Papilloma, Inverted / genetics*
  • Up-Regulation

Substances

  • Biomarkers, Tumor
  • MIRN214 microRNA, human
  • MicroRNAs