Detection of hepatitis E virus genotype 3 in pigs from subsistence farms in the state of Mato Grosso, Brazil

Comp Immunol Microbiol Infect Dis. 2018 Jun:58:11-16. doi: 10.1016/j.cimid.2018.06.002. Epub 2018 Jun 13.

Abstract

Hepatitis E is a zoonotic disease, recognized as an important global public health concern. In this study, molecular detection of the ORF1 and ORF2 genomic regions of the hepatitis E virus (HEV) was carried out in fecal and serum samples from pigs in subsistence farms of Mato Grosso, Brazil. Fragments of the ORF2 region were amplified in 8% (12/150) of fecal samples, with 53.3% (8/15) of farms having positive results. Of the 12 positive samples, fragments of the ORF1 region were amplified in 33.3% (4/12) of these. Molecular characterization confirmed the phylogenetic groupings as HEV subtypes 3d, 3 h, and 3i. The results revealed that meat from pigs that was originally meant for personal consumption is being traded in marketplaces in metropolitan Cuiabá, thereby creating a source of transmission to consumers in Mato Grosso. The environmental conditions must be taken into account when investigating the presence and transmission of HEV.

Keywords: Brazil; Genotype 3; Hepatitis E virus; Subsistence farms; Zoonosis.

MeSH terms

  • Animals
  • Brazil / epidemiology
  • Farms
  • Feces / virology
  • Genetic Variation
  • Genotype*
  • Hepatitis E / diagnosis
  • Hepatitis E / epidemiology
  • Hepatitis E / transmission
  • Hepatitis E / veterinary*
  • Hepatitis E virus / classification
  • Hepatitis E virus / genetics
  • Hepatitis E virus / isolation & purification*
  • Meat / virology
  • Phylogeny
  • RNA, Viral / genetics
  • Swine
  • Swine Diseases / diagnosis*
  • Swine Diseases / epidemiology
  • Swine Diseases / transmission
  • Swine Diseases / virology
  • Zoonoses / diagnosis
  • Zoonoses / epidemiology*
  • Zoonoses / transmission
  • Zoonoses / virology

Substances

  • RNA, Viral