Identification of several cell cycle relevant genes highly correlated with the progression and prognosis of human bladder urothelial tumor

J Cell Physiol. 2019 Aug;234(8):13439-13451. doi: 10.1002/jcp.28023. Epub 2019 Jan 7.

Abstract

The incidence of bladder cancer (BCa) in China is the highest among genitourinary system tumors, and its progression is affected by multitudinous pathways, of which cell cycle progress plays an important role. This study screened and enriched differentially expressed genes (DEGs) from four gene expression profiles using bioinformatics analysis methods. The enrichment and analysis of gene function showed that these genes were highly correlated with cell cycle regulation. Identification of candidate small molecules was conducted to evaluate the application of clinical transformation in these DEGs. Prognostic and stage-related expression analysis further sorted five highly expressed genes associated with worse prognosis and higher stages in patients with BCa. Further analysis revealed their interaction in cell cycle regulation and genetical alteration. Meanwhile, we validated the elevated expression of these genes through transcription and translation levels. Taking the results together, we could infer that these five genes are valuable in diagnosis, prediction, and providing candidate therapeutic targets for patients with BCa in different stages.

Keywords: bioinformatics analysis; biomarker; bladder cancer; cell cycle.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers, Tumor / genetics
  • Chromosomal Proteins, Non-Histone / genetics
  • Computational Biology
  • Cyclin A2 / genetics
  • Disease Progression
  • Extracellular Matrix Proteins / genetics
  • Gene Ontology
  • Gene Regulatory Networks
  • Genes, cdc*
  • Humans
  • Hyaluronan Receptors / genetics
  • Kaplan-Meier Estimate
  • Kinesins / genetics
  • Microfilament Proteins / genetics
  • Neoplasm Staging
  • Prognosis
  • Protein Interaction Maps / genetics
  • Transcriptome
  • Urinary Bladder Neoplasms / genetics*
  • Urinary Bladder Neoplasms / mortality
  • Urinary Bladder Neoplasms / pathology

Substances

  • Biomarkers, Tumor
  • CCNA2 protein, human
  • Chromosomal Proteins, Non-Histone
  • Cyclin A2
  • Extracellular Matrix Proteins
  • Hyaluronan Receptors
  • KIF11 protein, human
  • KIF20A protein, human
  • Microfilament Proteins
  • centromere protein F
  • hyaluronan-mediated motility receptor
  • Kinesins