Forecasting future Humphrey Visual Fields using deep learning

PLoS One. 2019 Apr 5;14(4):e0214875. doi: 10.1371/journal.pone.0214875. eCollection 2019.

Abstract

Purpose: To determine if deep learning networks could be trained to forecast future 24-2 Humphrey Visual Fields (HVFs).

Methods: All data points from consecutive 24-2 HVFs from 1998 to 2018 were extracted from a university database. Ten-fold cross validation with a held out test set was used to develop the three main phases of model development: model architecture selection, dataset combination selection, and time-interval model training with transfer learning, to train a deep learning artificial neural network capable of generating a point-wise visual field prediction. The point-wise mean absolute error (PMAE) and difference in Mean Deviation (MD) between predicted and actual future HVF were calculated.

Results: More than 1.7 million perimetry points were extracted to the hundredth decibel from 32,443 24-2 HVFs. The best performing model with 20 million trainable parameters, CascadeNet-5, was selected. The overall point-wise PMAE for the test set was 2.47 dB (95% CI: 2.45 dB to 2.48 dB), and deep learning showed a statistically significant improvement over linear models. The 100 fully trained models successfully predicted future HVFs in glaucomatous eyes up to 5.5 years in the future with a correlation of 0.92 between the MD of predicted and actual future HVF and an average difference of 0.41 dB.

Conclusions: Using unfiltered real-world datasets, deep learning networks show the ability to not only learn spatio-temporal HVF changes but also to generate predictions for future HVFs up to 5.5 years, given only a single HVF.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • Adult
  • Aged
  • Algorithms
  • Databases, Factual
  • Deep Learning*
  • Disease Progression
  • Female
  • Forecasting
  • Glaucoma / diagnosis
  • Glaucoma / physiopathology
  • Humans
  • Linear Models
  • Male
  • Middle Aged
  • Models, Statistical
  • Spatio-Temporal Analysis
  • Visual Field Tests / methods
  • Visual Field Tests / statistics & numerical data*
  • Visual Fields