A ribose modification of Spinach aptamer accelerates lead(ii) cation association in vitro

Chem Commun (Camb). 2019 May 25;55(42):5882-5885. doi: 10.1039/c9cc01697j. Epub 2019 Apr 30.

Abstract

Spinach aptamer fluorescence requires formation of a tripartite complex composed of folded RNA, a GFP-like fluorophore, and selective cation coordination. 2'F pyrimidine modified Spinach has retained fluorescence, increased chemical stability, and accelerated cation association via increased G-quadruplex dynamics, thereby reducing readout time and enhancing Spinach utility for aqueous Pb2+ detection.

MeSH terms

  • Aptamers, Nucleotide / chemistry*
  • Cations, Divalent
  • Circular Dichroism
  • Fluorescence
  • Fluorescent Dyes / chemistry
  • G-Quadruplexes
  • In Vitro Techniques
  • Lead / chemistry*
  • Nucleic Acid Conformation
  • Ribose / chemistry*
  • Spectrometry, Fluorescence

Substances

  • Aptamers, Nucleotide
  • Cations, Divalent
  • Fluorescent Dyes
  • Lead
  • Ribose