Structure-Guided Identification of Resistance Breaking Antimalarial N‑Myristoyltransferase Inhibitors

Cell Chem Biol. 2019 Jul 18;26(7):991-1000.e7. doi: 10.1016/j.chembiol.2019.03.015. Epub 2019 May 9.

Abstract

The attachment of myristate to the N-terminal glycine of certain proteins is largely a co-translational modification catalyzed by N-myristoyltransferase (NMT), and involved in protein membrane-localization. Pathogen NMT is a validated therapeutic target in numerous infectious diseases including malaria. In Plasmodium falciparum, NMT substrates are important in essential processes including parasite gliding motility and host cell invasion. Here, we generated parasites resistant to a particular NMT inhibitor series and show that resistance in an in vitro parasite growth assay is mediated by a single amino acid substitution in the NMT substrate-binding pocket. The basis of resistance was validated and analyzed with a structure-guided approach using crystallography, in combination with enzyme activity, stability, and surface plasmon resonance assays, allowing identification of another inhibitor series unaffected by this substitution. We suggest that resistance studies incorporated early in the drug development process help selection of drug combinations to impede rapid evolution of parasite resistance.

Keywords: N-myristoyltransferase; Plasmodium; antimalarial target; crystal structure; drug resistance development; genetic manipulation; malaria; myristoylation; post-translational modification; protein lipidation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acyltransferases / antagonists & inhibitors
  • Acyltransferases / genetics*
  • Acyltransferases / metabolism*
  • Amino Acid Sequence
  • Antimalarials / chemistry
  • Enzyme Inhibitors / chemistry
  • Humans
  • Malaria, Falciparum / drug therapy
  • Plasmodium falciparum / drug effects
  • Plasmodium falciparum / metabolism
  • Polymorphism, Single Nucleotide / genetics
  • Protein Processing, Post-Translational

Substances

  • Antimalarials
  • Enzyme Inhibitors
  • Acyltransferases
  • glycylpeptide N-tetradecanoyltransferase