Characterization of a novel salt-, xylose- and alkali-tolerant GH43 bifunctional β-xylosidase/α-l-arabinofuranosidase from the gut bacterial genome

J Biosci Bioeng. 2019 Oct;128(4):429-437. doi: 10.1016/j.jbiosc.2019.03.018. Epub 2019 May 17.

Abstract

A GH43 bifunctional β-xylosidase encoding gene (XylRBM26) was cloned from Massilia sp. RBM26 and successfully expressed in Escherichia coli. Recombinant XylRBM26 exhibited β-xylosidase and α-l-arabinofuranosidase activities. When 4-nitrophenyl-β-d-xylopyranoside was used as a substrate, the enzyme reached optimal activity at pH 6.5 and 50°C and remained stable at pH 5.0-10.0. Purified XylRBM26 presented good salt tolerance and retained 96.6% activity in 3.5 M NaCl and 77.9% initial activity even in 4.0 M NaCl. In addition, it exhibited high tolerance to xylose with Ki value of 500 mM. This study was the first to identify and characterize NaCl-tolerant β-xylosidase/α-l-arabinofuranosidase from the gut microbiota. The enzyme's salt, xylose, and alkali stability and resistance to various chemicals make it a potential biocatalyst for the saccharification of lignocellulose, the food industry, and industrial processes conducted in sea water.

Keywords: Gut; Massilia sp.; Salt tolerance; α-l-Arabinofuranosidase; β-Xylosidase.

MeSH terms

  • Alkalies
  • Gastrointestinal Microbiome*
  • Genome, Bacterial*
  • Glycoside Hydrolases / genetics
  • Glycoside Hydrolases / metabolism*
  • Hydrogen-Ion Concentration
  • Substrate Specificity
  • Xylose / metabolism
  • Xylosidases / genetics
  • Xylosidases / metabolism*

Substances

  • Alkalies
  • Xylose
  • Glycoside Hydrolases
  • Xylosidases
  • exo-1,4-beta-D-xylosidase
  • alpha-N-arabinofuranosidase