Genome sequence and description of Coprococcus phoceensis gen. nov., sp. nov., a new bacterial genus isolated from the human left colon

M Bonnet; D Ricaboni; M Mailhe; V Vitton; A Benezech; J Delerce; D Raoult; N Cassir; B Lascola; S Khelaifia

doi:10.1016/j.nmni.2019.100548

Genome sequence and description of Coprococcus phoceensis gen. nov., sp. nov., a new bacterial genus isolated from the human left colon

New Microbes New Infect. 2019 Apr 10:30:100548. doi: 10.1016/j.nmni.2019.100548. eCollection 2019 Jul.

Authors

M Bonnet¹, D Ricaboni^{1

2

3}, M Mailhe¹, V Vitton⁴, A Benezech⁴, J Delerce¹, D Raoult^{1

2}, N Cassir¹, B Lascola¹, S Khelaifia^{1

2}

Affiliations

¹ Aix-Marseille Université, IRD, APHM, MEPHI, Marseille, France.
² Institut Hospitalo-Universitaire Méditerranée Infection, Marseillle, France.
³ Département des sciences cliniques et biomédicales, Luigi Sacco, Division des Maladies Infectieuses III, Université de Milan, Milan, Italy.
⁴ Service de Gastroentérologie, Hopital Nord, Assistance Publique-Hopitaux de Marseille, Marseille, France.

Abstract

We report here the main characteristics of Coprococcus phoceensis strain Marseille-P3062^T (CSUR P3062). The 16S rDNA sequencing and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry spectrum analysis were used to identify and characterize this new anaerobic bacterial species, which was isolated from the left colon cleansing of a 25-year-old French man with Crohn's disease.

Keywords: Coprococcus phoceensis; culturomics; genome; gut microbiota; taxonogenomics.