Poly(ADP-ribose) polymerase forms loops with DNA

Biochem Biophys Res Commun. 1987 Nov 13;148(3):913-9. doi: 10.1016/s0006-291x(87)80219-x.

Abstract

The interaction between highly purified poly(ADP-ribose) polymerase from calf thymus and different topological forms of pBR322 DNA has been studied by gel retardation electrophoresis and electron microscopy. We show that: (i) in the absence of nicks on DNA the enzyme has a marked affinity for supercoiled (form I) DNA, (ii) in the presence of single stranded breaks poly(ADP-ribose) polymerase preferentially binds to form II, (iii) in all cases enzyme molecules are frequently located at DNA intersections, (iv) a cooperative binding of the enzyme on DNA occurs.

MeSH terms

  • DNA / metabolism*
  • DNA, Superhelical / metabolism
  • DNA-Binding Proteins / metabolism*
  • Electrophoresis
  • In Vitro Techniques
  • Microscopy, Electron
  • Nucleic Acid Conformation
  • Poly(ADP-ribose) Polymerases / metabolism*
  • Substrate Specificity

Substances

  • DNA, Superhelical
  • DNA-Binding Proteins
  • DNA
  • Poly(ADP-ribose) Polymerases