Epigenetic identification of ADCY4 as a biomarker for breast cancer: an integrated analysis of adenylate cyclases

Epigenomics. 2019 Nov;11(14):1561-1579. doi: 10.2217/epi-2019-0207. Epub 2019 Oct 4.

Abstract

Aim: To explore the role of adenylyl cyclase isoforms and its epigenetics in cancer. Materials & methods: Adenylyl cyclase expression profiles, epigenetic alterations, prognostic value and molecular networks were assessed by use of public omics datasets. Results:ADCY4 was significantly downregulated in breast cancer. This downregulation was associated with promoter hypermethylation. High ADCY4 expression was correlated with better survival of patients with breast cancer and its different intrinsic subtypes and tumor stages. ADCY4 was shown to be strongly associated with G protein coupled receptors and the downstream cAMP signaling pathway, which was also significantly enriched in newly identified lysophosphatidic acid receptor 4 and glucagon-like peptide-1. Conclusion: ADCY4 may be used as an epigenetic biomarker for breast cancer, as well as a possible target for therapy.

Keywords: DNA methylation; G protein-coupled receptor; adenylyl cyclases; biomarker; breast cancer; cAMP signaling pathway; lysophosphatidic acid receptor; prognosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenylyl Cyclases / genetics*
  • Biomarkers, Tumor / genetics*
  • Breast Neoplasms / genetics*
  • Breast Neoplasms / pathology
  • DNA Methylation / genetics
  • Down-Regulation / genetics
  • Epigenesis, Genetic / genetics*
  • Epigenomics / methods
  • Female
  • Humans
  • Prognosis
  • Promoter Regions, Genetic / genetics
  • Receptors, G-Protein-Coupled / genetics
  • Signal Transduction / genetics

Substances

  • Biomarkers, Tumor
  • Receptors, G-Protein-Coupled
  • Adenylyl Cyclases
  • adenylyl cyclase 4