Detection of key gene InDels in TGF-β pathway and its relationship with growth traits in four sheep breeds

Anim Biotechnol. 2021 Apr;32(2):194-204. doi: 10.1080/10495398.2019.1675682. Epub 2019 Oct 18.

Abstract

TGF-β signaling pathway plays an important role in regulating cell proliferation and differentiation, embryonic development, bone formation, etc. LTBP1, THBS1, SMAD4 and other genes are important members of TGF-β signaling pathway. LTBP1 binds to TGF-β, while THBS1 binds to LTBP1, which is an important signal transduction molecule in the TGF-β pathway. In order to explore the effects of the insertion/deletion variation of three genes (LTBP1, THBS1, SMAD4) in the TGF-β signaling pathway on the growth traits such as body length and body weight of sheep, a total of 625 healthy individuals from 4 breeds of the Tong sheep, Hu sheep, small-tail Han sheep and Lanzhou fat-tail sheep were identified and analyzed. In this study, we identified 4 InDel loci: one loci of LTBP1, two loci of THBS1, and one loci of SMAD4, respectively named as: InDel-1 (deletion 13 bp), InDel-2 (deletion 16 bp), InDel-3 (deletion 22 bp), InDel-4 (deletion 7 bp). Among the 4 analyzed breeds, association analysis showed that all new InDel polymorphisms were significantly associated with 10 different growth traits (p < 0.05), which may provide a theoretical basis for sheep breeding to accelerate the progression of marker-assisted selection in sheep breeding.

Keywords: Growth traits; LTBP1; SMAD4; THBS1; insertion/deletion (InDel).

MeSH terms

  • Animals
  • Genotype
  • INDEL Mutation
  • Latent TGF-beta Binding Proteins / genetics
  • Latent TGF-beta Binding Proteins / metabolism
  • Polymerase Chain Reaction
  • Sheep / genetics*
  • Sheep / growth & development*
  • Signal Transduction / genetics*
  • Signal Transduction / physiology
  • Smad4 Protein / genetics
  • Smad4 Protein / metabolism
  • Thrombospondin 1 / genetics
  • Thrombospondin 1 / metabolism
  • Transforming Growth Factor beta / genetics*

Substances

  • Latent TGF-beta Binding Proteins
  • Smad4 Protein
  • Thrombospondin 1
  • Transforming Growth Factor beta