PCNA Deubiquitylases Control DNA Damage Bypass at Replication Forks

Cell Rep. 2019 Oct 29;29(5):1323-1335.e5. doi: 10.1016/j.celrep.2019.09.054.

Abstract

DNA damage tolerance plays a key role in protecting cell viability through translesion synthesis and template switching-mediated bypass of genotoxic polymerase-blocking base lesions. Both tolerance pathways critically rely on ubiquitylation of the proliferating-cell nuclear antigen (PCNA) on lysine 164 and have been proposed to operate uncoupled from replication. We report that Ubp10 and Ubp12 ubiquitin proteases differentially cooperate in PCNA deubiquitylation, owing to distinct activities on PCNA-linked ubiquitin chains. Ubp10 and Ubp12 associate with replication forks in a fashion determined by Ubp10 dependency on lagging-strand PCNA residence, and they downregulate translesion polymerase recruitment and template switch events engaging nascent strands. These findings reveal PCNAK164 deubiquitylation as a key mechanism for the modulation of lesion bypass during replication, which might set a framework for establishing strand-differential pathway choices. We propose that damage tolerance is tempered at replication forks to limit the extension of bypass events and sustain chromosome replication rates.

Keywords: DNA damage tolerance; DNA replication; PCNA; cell cycle; replication forks; ubiquitin-proteases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA Damage*
  • DNA Replication*
  • DNA, Fungal / biosynthesis
  • DNA-Directed DNA Polymerase / metabolism
  • Mutation / genetics
  • Proliferating Cell Nuclear Antigen / metabolism*
  • S Phase
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Templates, Genetic
  • Ubiquitin Thiolesterase / metabolism*
  • Ubiquitination*

Substances

  • DNA, Fungal
  • Proliferating Cell Nuclear Antigen
  • Saccharomyces cerevisiae Proteins
  • DNA-Directed DNA Polymerase
  • UBP10 protein, S cerevisiae
  • Ubiquitin Thiolesterase