Imaging Neuronal Activity with Fast and Sensitive Red-Shifted Electrochromic FRET Indicators

ACS Chem Neurosci. 2019 Dec 18;10(12):4768-4775. doi: 10.1021/acschemneuro.9b00501. Epub 2019 Nov 21.

Abstract

Genetically encoded voltage indicators (GEVIs) allow optical recording of neuronal activities with high spatial resolution. While most existing GEVIs emit in the green range, red-shifted GEVIs are highly sought after because they would enable simultaneous stimulation and recording of neuronal activities when paired with optogenetic actuators, or two-color imaging of signaling and neuronal activities when used along with GFP-based indicators. In this study, we present several improved red-shifted GEVIs based on the electrochromic Förster resonance energy transfer (eFRET) between orange/red fluorescent proteins/dyes and rhodopsin mutants. Through structure-guided mutagenesis and cell-based sensitivity screening, we identified a mutant rhodopsin with a single mutation that exhibited more than 2-fold improvement in voltage sensitivity. Notably, this mutation has been independently discovered by Pieribone et al. ( Pieribone, V. A. et al. Nat Methods 2018 , 15 ( 12 ), 1108 - 1116 ). In cultured rat hippocampal neurons, our sensors faithfully reported action potential waveforms and subthreshold activities. We also demonstrated that this mutation could enhance the sensitivity of hybrid indicators, thus providing insights for future development.

Keywords: Voltage imaging; fluorescent proteins; optogenetics; rhodopsin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetabularia / genetics
  • Action Potentials
  • Amino Acid Substitution
  • Animals
  • Cells, Cultured
  • Fluorescence Resonance Energy Transfer / methods*
  • Fluorescent Dyes / chemistry
  • Fluorescent Dyes / metabolism
  • HEK293 Cells
  • Hippocampus / cytology
  • Humans
  • Luminescent Proteins / chemistry
  • Models, Molecular
  • Mutation, Missense
  • Neurons / physiology*
  • Optogenetics
  • Point Mutation
  • Protein Conformation
  • Protein Engineering
  • Protein Transport
  • Rats
  • Recombinant Fusion Proteins / chemistry
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / metabolism
  • Rhodopsins, Microbial / chemistry*
  • Rhodopsins, Microbial / genetics
  • Voltage-Sensitive Dye Imaging / methods*

Substances

  • Fluorescent Dyes
  • Luminescent Proteins
  • Recombinant Fusion Proteins
  • Rhodopsins, Microbial
  • fluorescent protein 583