[Study of tumor necrosis factor receptor superfamily 1B gene polymorphism in relation to the outcomes of HCV infection]

Zhonghua Gan Zang Bing Za Zhi. 2019 Oct 20;27(10):793-798. doi: 10.3760/cma.j.issn.1007-3418.2019.10.011.
[Article in Chinese]

Abstract

Objective: To investigate the tumor necrosis factor receptor superfamily 1B gene (TNFRSF1B) polymorphism in relation to the outcomes of hepatitis C virus (HCV) infection. Methods: One thousand six hundred and forty-five cases without HCV infection, 545 cases with HCV clearance, and 783 cases with chronic HCV infection were enrolled. TaqMan probe method was used to investigate genotype rs1061622 (T > G) and rs1061624 (G > A). Two single nucleotide polymorphisms (SNPs) sites were genotyped and haplotypes were constructed to evaluate their relation with the outcome of HCV infection. Results: Logistic regression analysis showed that there was no relation to the two SNPs with HCV infection susceptibility and chronicity (P > 0.05). Haplotype analysis showed that carrier TA had an increased susceptibility to HCV infection [adjusted odds ratio (OR) = 1.15, 95% confidence interval (CI): 1.01 to 1.30, P = 0.038)]. Carrier TA and GG haplotypes were conducive to chronic HCV infection (adjusted OR = 1.28, 95% CI: 1.08 to 1.53, P = 0.006; OR = 1.31, 95% CI: 1.03 to 1.66, P = 0.026). Conclusion: The combinational effects of rs1061622 and rs1061624 in TNFRSF1B gene may increase the risk of HCV chronicity and infection.

目的: 探讨肿瘤坏死因子受体超家族1B(TNFRSF1B)基因多态性与丙型肝炎病毒(HCV)感染结局的相关性。 方法: 纳入1 645例无HCV感染者,545例HCV清除者,783例HCV慢性化者,采用TaqMan探针法对rs1061622(T > G)和rs1061624(G > A)两个单核苷酸多态性位点(SNP)进行基因分型,并构建单倍型,评估其与HCV感染结局的相关性。 结果: 经logistic回归分析均两个SNPs与HCV感染的易感性和慢性化无相关性(P值均> 0.05)。单倍型分析显示,携带TA单倍型可增加HCV感染的易感性[调整后比值比(OR)= 1.15,95%可信区间(CI):1.01~1.30,P = 0.038)],携带TA和GG单倍型均有利于HCV感染慢性化(调整后OR = 1.28,95% CI:1.08~1.53,P = 0.006;OR = 1.31, 95% CI:1.03~1.66,P = 0.026)。 结论: TNFRSF1B基因rs1061622和rs1061624的共同效应可增加HCV感染和慢性化的风险。.

Keywords: Chronicity; Gene polymorphism; Hepatitis C virus; Tumor necrosis factor receptor superfamily member 1B.

MeSH terms

  • Genetic Predisposition to Disease
  • Genotype
  • Haplotypes
  • Hepatitis C / genetics*
  • Humans
  • Polymorphism, Single Nucleotide
  • Receptors, Tumor Necrosis Factor, Type II / genetics*

Substances

  • Receptors, Tumor Necrosis Factor, Type II
  • TNFRSF1B protein, human