Bioinformatics analysis of whole slide images reveals significant neighborhood preferences of tumor cells in Hodgkin lymphoma

PLoS Comput Biol. 2020 Jan 21;16(1):e1007516. doi: 10.1371/journal.pcbi.1007516. eCollection 2020 Jan.

Abstract

In pathology, tissue images are evaluated using a light microscope, relying on the expertise and experience of pathologists. There is a great need for computational methods to quantify and standardize histological observations. Computational quantification methods become more and more essential to evaluate tissue images. In particular, the distribution of tumor cells and their microenvironment are of special interest. Here, we systematically investigated tumor cell properties and their spatial neighborhood relations by a new application of statistical analysis to whole slide images of Hodgkin lymphoma, a tumor arising in lymph nodes, and inflammation of lymph nodes called lymphadenitis. We considered properties of more than 400, 000 immunohistochemically stained, CD30-positive cells in 35 whole slide images of tissue sections from subtypes of the classical Hodgkin lymphoma, nodular sclerosis and mixed cellularity, as well as from lymphadenitis. We found that cells of specific morphology exhibited significantly favored and unfavored spatial neighborhood relations of cells in dependence of their morphology. This information is important to evaluate differences between Hodgkin lymph nodes infiltrated by tumor cells (Hodgkin lymphoma) and inflamed lymph nodes, concerning the neighborhood relations of cells and the sizes of cells. The quantification of neighborhood relations revealed new insights of relations of CD30-positive cells in different diagnosis cases. The approach is general and can easily be applied to whole slide image analysis of other tumor types.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Size
  • Computational Biology / methods*
  • Hodgkin Disease / diagnostic imaging
  • Hodgkin Disease / pathology*
  • Humans
  • Image Interpretation, Computer-Assisted / methods*
  • Immunohistochemistry
  • Reed-Sternberg Cells / cytology
  • Reed-Sternberg Cells / pathology
  • Tumor Microenvironment / physiology*

Grants and funding

JH was partly supported by one grant - the LOEWE program Ubiquitin Networks of the State Hesse (Germany) [20120712/B4]; Funder’s URL https://wissenschaft.hessen.de/wissenschaft/landesprogramm-loewe. HS is supported by the Wilhelm- Sander Stiftung No.2018.101.1. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.